Information for motif16


Reverse Opposite:

p-value:1e-31
log p-value:-7.291e+01
Information Content per bp:1.566
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif4.51%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets115.4 +/- 57.7bp
Average Position of motif in Background80.1 +/- 22.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0512.1_Rxra/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGTGACTGYTGA
NCTGACCTTTG-

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGTGACTGYTGA
-CTGACCTTTG-

MA0100.2_Myb/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TGTGACTGYTGA
--TGGCAGTTGN

PB0053.1_Rara_1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TGTGACTGYTGA--
NNNGTGACCTTTGNNN

PH0169.1_Tgif1/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TGTGACTGYTGA--
GATATTGACAGCTGCGT

MA0002.2_RUNX1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TGTGACTGYTGA
GTCTGTGGTTT----

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TGTGACTGYTGA
--TGGCAGTTGG

TR4(NR/DR1)/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TGTGACTGYTGA----
--TGACCTTTGACCTC

MA0491.1_JUND/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TGTGACTGYTGA
GGTGACTCATC-

MA0017.1_NR2F1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TGTGACTGYTGA----
--TGACCTTTGAACCT