Information for motif17


Reverse Opposite:

p-value:1e-30
log p-value:-7.103e+01
Information Content per bp:1.554
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif5.10%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.53%
Average Position of motif in Targets99.2 +/- 53.4bp
Average Position of motif in Background163.2 +/- 36.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0146.2_Zfx/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GVAGCCTCCVCC---
-CAGGCCNNGGCCNN

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GVAGCCTCCVCC
NGAAGC-------

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GVAGCCTCCVCC
----CCCCCCCC

PB0203.1_Zfp691_2/Jaspar

Match Rank:4
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------GVAGCCTCCVCC
NTNNNAGGAGTCTCNTN-

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GVAGCCTCCVCC
CGGAGC-------

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GVAGCCTCCVCC-
---GCCMCRCCCH

MA0039.2_Klf4/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GVAGCCTCCVCC-
---GCCCCACCCA

MA0599.1_KLF5/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GVAGCCTCCVCC-
---GCCCCGCCCC

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GVAGCCTCCVCC
-CAGCC------

POL003.1_GC-box/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GVAGCCTCCVCC----
--NAGCCCCGCCCCCN