Information for motif18


Reverse Opposite:

p-value:1e-30
log p-value:-7.103e+01
Information Content per bp:1.814
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif5.10%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets91.1 +/- 57.2bp
Average Position of motif in Background66.3 +/- 42.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:1
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----TAGTGGTA-----
NNANTGGTGGTCTTNNN

MA0027.1_En1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TAGTGGTA---
AAGTAGTGCCC

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TAGTGGTA--
NNHTGTGGTTWN

MA0122.1_Nkx3-2/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TAGTGGTA
TTAAGTGGA-

MA0130.1_ZNF354C/Jaspar

Match Rank:5
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TAGTGGTA
--GTGGAT

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TAGTGGTA-
NNTGTGGTTT

MA0511.1_RUNX2/Jaspar

Match Rank:7
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TAGTGGTA--
GGGGTTTGTGGTTTG

PB0114.1_Egr1_2/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TAGTGGTA----
TGCGGAGTGGGACTGG

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TAGTGGTA
TTGAGTGSTT

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:10
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TAGTGGTA
CTYRAGTGSY-