Information for motif20


Reverse Opposite:

p-value:1e-29
log p-value:-6.900e+01
Information Content per bp:1.796
Number of Target Sequences with motif152.0
Percentage of Target Sequences with motif18.03%
Number of Background Sequences with motif45.5
Percentage of Background Sequences with motif6.45%
Average Position of motif in Targets106.8 +/- 52.6bp
Average Position of motif in Background85.6 +/- 62.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0090.1_TEAD1/Jaspar

Match Rank:1
Score:0.91
Offset:-3
Orientation:reverse strand
Alignment:---AGGAATGT-
CNGAGGAATGTG

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.88
Offset:-2
Orientation:forward strand
Alignment:--AGGAATGT
NCTGGAATGC

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:3
Score:0.87
Offset:-2
Orientation:forward strand
Alignment:--AGGAATGT
CCWGGAATGY

MA0081.1_SPIB/Jaspar

Match Rank:4
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--AGGAATGT
AGAGGAA---

MA0598.1_EHF/Jaspar

Match Rank:5
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-AGGAATGT
CAGGAAGG-

PB0178.1_Sox8_2/Jaspar

Match Rank:6
Score:0.70
Offset:-6
Orientation:reverse strand
Alignment:------AGGAATGT
NNTNTCATGAATGT

PB0170.1_Sox17_2/Jaspar

Match Rank:7
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----AGGAATGT----
NTTNTATGAATGTGNNC

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AGGAATGT--
AAGGCAAGTGT

MA0136.1_ELF5/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AGGAATGT
AAGGAAGTA

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:10
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AGGAATGT
AVCAGGAAGT-