Information for motif22


Reverse Opposite:

p-value:1e-25
log p-value:-5.812e+01
Information Content per bp:1.924
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.08%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets82.1 +/- 52.5bp
Average Position of motif in Background37.6 +/- 8.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-AGCACCTC
TGACACCT-

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:2
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----AGCACCTC-----
NNTNCGCACCTGTNGAN

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AGCACCTC--
NNCACCTGNN

PB0117.1_Eomes_2/Jaspar

Match Rank:4
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----AGCACCTC---
NNGGCGACACCTCNNN

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:5
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AGCACCTC
ATTAACACCT-

MA0259.1_HIF1A::ARNT/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AGCACCTC-
-GCACGTNC

HIF-1a(HLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGCACCTC
BGCACGTA

MA0103.2_ZEB1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGCACCTC
CCTCACCTG

HIF2a(HLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AGCACCTC---
-GCACGTACCC

MA0595.1_SREBF1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGCACCTC--
ATCACCCCAC