Information for motif25


Reverse Opposite:

p-value:1e-22
log p-value:-5.149e+01
Information Content per bp:1.442
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif4.15%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.50%
Average Position of motif in Targets88.3 +/- 62.0bp
Average Position of motif in Background138.7 +/- 19.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CACCGCCTCTGC
CACTTCCTCT--

MA0516.1_SP2/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CACCGCCTCTGC--
GCCCCGCCCCCTCCC

MA0079.3_SP1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CACCGCCTCTGC
GCCCCGCCCCC--

POL003.1_GC-box/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CACCGCCTCTGC
NAGCCCCGCCCCCN-

PB0110.1_Bcl6b_2/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CACCGCCTCTGC--
ATCCCCGCCCCTAAAA

PB0202.1_Zfp410_2/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CACCGCCTCTGC--
TCACCCCGCCCCAAATT

Sp1(Zf)/Promoter/Homer

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CACCGCCTCTGC
GGCCCCGCCCCC--

MA0162.2_EGR1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CACCGCCTCTGC-
CCCCCGCCCCCGCC

PB0164.1_Smad3_2/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CACCGCCTCTGC-
TACGCCCCGCCACTCTG

PB0010.1_Egr1_1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CACCGCCTCTGC---
-TCCGCCCCCGCATT