Information for motif26


Reverse Opposite:

p-value:1e-22
log p-value:-5.126e+01
Information Content per bp:1.730
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.56%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.42%
Average Position of motif in Targets107.1 +/- 60.8bp
Average Position of motif in Background148.9 +/- 43.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0132.1_Hbp1_2/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GGGCAAAATGGG----
NNTNNACAATGGGANNN

MA0095.2_YY1/Jaspar

Match Rank:2
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GGGCAAAATGGG---
---CAAGATGGCGGC

MA0163.1_PLAG1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GGGCAAAATGGG-
GGGGCCCAAGGGGG

MA0597.1_THAP1/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GGGCAAAATGGG
TNNGGGCAG------

MA0088.1_znf143/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GGGCAAAATGGG-----
GCAAGGCATGATGGGAAATC

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GGGCAAAATGGG----
-RGSMTBCTGGGAAAT

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GGGCAAAATGGG
--GAACAATGGN

PB0168.1_Sox14_2/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGGCAAAATGGG--
CTCACACAATGGCGC

YY1(Zf)/Promoter/Homer

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GGGCAAAATGGG---
---CAAGATGGCGGC

PB0124.1_Gabpa_2/Jaspar

Match Rank:10
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----GGGCAAAATGGG
NNNNGGGGGAAGANGG-