Information for motif27


Reverse Opposite:

p-value:1e-22
log p-value:-5.094e+01
Information Content per bp:1.864
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif4.63%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.64%
Average Position of motif in Targets91.1 +/- 56.2bp
Average Position of motif in Background83.2 +/- 36.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0152.1_NFATC2/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TTTCCCCG
TTTTCCA--

E2F(E2F)/Cell-Cycle-Exp/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTTCCCCG----
TTTTCGCGCGAA

MA0144.2_STAT3/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTTCCCCG---
TTTCCCAGAAN

MA0137.3_STAT1/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTTCCCCG---
TTTCCTGGAAA

MA0518.1_Stat4/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TTTCCCCG---
NNNTTTCCTGGAAA

MA0056.1_MZF1_1-4/Jaspar

Match Rank:6
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TTTCCCCG
--TCCCCA

MA0519.1_Stat5a::Stat5b/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TTTCCCCG--
ATTTCCAAGAA

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TTTCCCCG---
VDTTTCCCGCCA

MA0081.1_SPIB/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TTTCCCCG
-TTCCTCT

MA0105.3_NFKB1/Jaspar

Match Rank:10
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----TTTCCCCG
GGGAATTTCCC--