Information for motif28


Reverse Opposite:

p-value:1e-20
log p-value:-4.616e+01
Information Content per bp:1.607
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.32%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.42%
Average Position of motif in Targets108.0 +/- 53.9bp
Average Position of motif in Background118.4 +/- 42.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0035.3_Gata1/Jaspar

Match Rank:1
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:TGAGATAAGTAG
ANAGATAAGAA-

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:2
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:TGAGATAAGTAG
-NAGATAAGNN-

MA0482.1_Gata4/Jaspar

Match Rank:3
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-TGAGATAAGTAG
NNGAGATAAGA--

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:4
Score:0.77
Offset:1
Orientation:forward strand
Alignment:TGAGATAAGTAG
-CAGATAAGGN-

MA0036.2_GATA2/Jaspar

Match Rank:5
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:TGAGATAAGTAG--
NCAGATAAGAANNN

MA0037.2_GATA3/Jaspar

Match Rank:6
Score:0.74
Offset:2
Orientation:forward strand
Alignment:TGAGATAAGTAG
--AGATAAGA--

PB0021.1_Gata3_1/Jaspar

Match Rank:7
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----TGAGATAAGTAG-----
TTTTTAGAGATAAGAAATAAAG

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:8
Score:0.71
Offset:0
Orientation:forward strand
Alignment:TGAGATAAGTAG
NBWGATAAGR--

PB0023.1_Gata6_1/Jaspar

Match Rank:9
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---TGAGATAAGTAG--
TATAGAGATAAGAATTG

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.70
Offset:2
Orientation:forward strand
Alignment:TGAGATAAGTAG
--AGATAASR--