Information for motif3


Reverse Opposite:

p-value:1e-59
log p-value:-1.381e+02
Information Content per bp:1.611
Number of Target Sequences with motif67.0
Percentage of Target Sequences with motif7.95%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.56%
Average Position of motif in Targets101.8 +/- 49.7bp
Average Position of motif in Background73.5 +/- 43.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.31
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:GCCCGGGCGGCS-
-----GGCGCGCT

MA0597.1_THAP1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GCCCGGGCGGCS
-TNNGGGCAG--

PB0052.1_Plagl1_1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GCCCGGGCGGCS----
TTGGGGGCGCCCCTAG

PB0010.1_Egr1_1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GCCCGGGCGGCS
ANTGCGGGGGCGGN-

MA0162.2_EGR1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCCCGGGCGGCS-
GGCGGGGGCGGGGG

Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCCCGGGCGGCS
NGCGTGGGCGGR-

MA0469.1_E2F3/Jaspar

Match Rank:7
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------GCCCGGGCGGCS
NNGTGNGGGCGGGAG---

MA0470.1_E2F4/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCCCGGGCGGCS
GGGCGGGAAGG-

MA0471.1_E2F6/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCCCGGGCGGCS
GGGCGGGAAGG-

PB0103.1_Zic3_1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GCCCGGGCGGCS
CCCCCCCGGGGGGGT