Information for motif32


Reverse Opposite:

p-value:1e-16
log p-value:-3.880e+01
Information Content per bp:1.706
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif2.97%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.41%
Average Position of motif in Targets108.7 +/- 50.9bp
Average Position of motif in Background54.9 +/- 46.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CGCGGTAG
GGCGCGCT--

MA0059.1_MYC::MAX/Jaspar

Match Rank:2
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CGCGGTAG
GACCACGTGGT--

c-Myc(HLH)/LNCAP-cMyc-ChIP-Seq(unpublished)/Homer

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CGCGGTAG
CACGTGGN--

MA0024.2_E2F1/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CGCGGTAG-
CGGGCGGGAGG

MA0104.3_Mycn/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CGCGGTAG
CACGTGGC--

MA0259.1_HIF1A::ARNT/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CGCGGTAG
GGACGTGC---

PB0043.1_Max_1/Jaspar

Match Rank:7
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------CGCGGTAG--
TGACCACGTGGTCGGG

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CGCGGTAG
CACGTGNT--

MA0130.1_ZNF354C/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CGCGGTAG--
----GTGGAT

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CGCGGTAG
TGCGTG----