Information for motif33


Reverse Opposite:

p-value:1e-15
log p-value:-3.503e+01
Information Content per bp:1.634
Number of Target Sequences with motif63.0
Percentage of Target Sequences with motif7.47%
Number of Background Sequences with motif16.0
Percentage of Background Sequences with motif2.27%
Average Position of motif in Targets93.1 +/- 55.9bp
Average Position of motif in Background104.7 +/- 43.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0498.1_Meis1/Jaspar

Match Rank:1
Score:0.74
Offset:-6
Orientation:reverse strand
Alignment:------CTGACCGT-
NNNTGAGTGACAGCT

MA0100.2_Myb/Jaspar

Match Rank:2
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:CTGACCGT---
-TGGCAGTTGN

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:CTGACCGT--
CTGACCTTTG

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CTGACCGT--
NTGACCTTGA

MA0141.2_Esrrb/Jaspar

Match Rank:5
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CTGACCGT-----
-TGACCTTGANNN

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:6
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CTGACCGT
-TGACCT-

MA0071.1_RORA_1/Jaspar

Match Rank:7
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CTGACCGT---
-TGACCTTGAT

MA0160.1_NR4A2/Jaspar

Match Rank:8
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CTGACCGT
GTGACCTT

MA0592.1_ESRRA/Jaspar

Match Rank:9
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CTGACCGT--
NGTGACCTTGG

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:10
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CTGACCGT---
-TGGCAGTTGG