Information for motif35


Reverse Opposite:

p-value:1e-11
log p-value:-2.587e+01
Information Content per bp:1.530
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.73%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.47%
Average Position of motif in Targets93.3 +/- 54.1bp
Average Position of motif in Background110.3 +/- 56.9bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0117.1_Mafb/Jaspar

Match Rank:1
Score:0.67
Offset:4
Orientation:forward strand
Alignment:CCACGCTGACAC
----GCTGACGC

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CCACGCTGACAC-
---TGCTGACTCA

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CCACGCTGACAC
-CACGCA-----

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:CCACGCTGACAC--
------TGACACCT

MA0258.2_ESR2/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCACGCTGACAC
AGGNCANNGTGACCT

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCACGCTGACAC-
-GGTGYTGACAGS

MA0498.1_Meis1/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CCACGCTGACAC------
---AGCTGTCACTCACCT

ERE(NR/IR3)/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CCACGCTGACAC-
GGTCANNGTGACCTN

MA0130.1_ZNF354C/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CCACGCTGACAC
ATCCAC--------

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:10
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CCACGCTGACAC--
----KTTCACACCT