Information for motif4


Reverse Opposite:

p-value:1e-58
log p-value:-1.346e+02
Information Content per bp:1.674
Number of Target Sequences with motif48.0
Percentage of Target Sequences with motif5.69%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets96.2 +/- 54.7bp
Average Position of motif in Background81.9 +/- 36.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0155.1_INSM1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCTTGGTGGCGC
TGTCAGGGGGCG-

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GCTTGGTGGCGC-----
GCCASCAGGGGGCGCYVNNG

GLI3(Zf)/GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCTTGGTGGCGC
CGTGGGTGGTCC

MA0139.1_CTCF/Jaspar

Match Rank:4
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----GCTTGGTGGCGC--
TGGCCACCAGGGGGCGCTA

PB0156.1_Plagl1_2/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCTTGGTGGCGC-----
GCTGGGGGGTACCCCTT

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer

Match Rank:6
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----GCTTGGTGGCGC---
TGGCCACCAGGTGGCACTNT

MA0130.1_ZNF354C/Jaspar

Match Rank:7
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:GCTTGGTGGCGC
-----GTGGAT-

PB0117.1_Eomes_2/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCTTGGTGGCGC---
GCGGAGGTGTCGCCTC

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCTTGGTGGCGC
NNCAGGTGNN--

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GCTTGGTGGCGC
---AGGTGTCA-