Information for motif5


Reverse Opposite:

p-value:1e-51
log p-value:-1.197e+02
Information Content per bp:1.782
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif5.22%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets111.0 +/- 59.9bp
Average Position of motif in Background128.6 +/- 62.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:GYCCTGGGAK--
--CSTGGGAAAD

MA0524.1_TFAP2C/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GYCCTGGGAK----
TGCCCTGGGGCNANN

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GYCCTGGGAK-
TCCCCTGGGGAC

MA0154.2_EBF1/Jaspar

Match Rank:4
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GYCCTGGGAK
GTCCCCAGGGA-

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:5
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GYCCTGGGAK--
RGSMTBCTGGGAAAT

MA0003.2_TFAP2A/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GYCCTGGGAK----
TGCCCTGAGGCANTN

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GYCCTGGGAK
ATGCCCTGAGGC

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:8
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GYCCTGGGAK
NGTCCCNNGGGA-

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GYCCTGGGAK--
NTGCCCANNGGTNA

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GYCCTGGGAK
TGACCTTGAN-