Information for motif6


Reverse Opposite:

p-value:1e-51
log p-value:-1.197e+02
Information Content per bp:1.711
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif5.22%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets86.4 +/- 41.6bp
Average Position of motif in Background96.3 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Fox:Ebox(Forkhead:HLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-YTGTTAACAAAG----
NSTGTTTRCWCAGBNNN

PB0018.1_Foxk1_1/Jaspar

Match Rank:2
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---YTGTTAACAAAG--
AAAATGTAAACAAACAG

PB0016.1_Foxj1_1/Jaspar

Match Rank:3
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-YTGTTAACAAAG---
AAAGTAAACAAAAATT

PB0019.1_Foxl1_1/Jaspar

Match Rank:4
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---YTGTTAACAAAG--
TAAATGTAAACAAAGGT

MA0442.1_SOX10/Jaspar

Match Rank:5
Score:0.72
Offset:6
Orientation:reverse strand
Alignment:YTGTTAACAAAG
------ACAAAG

PB0071.1_Sox4_1/Jaspar

Match Rank:6
Score:0.71
Offset:0
Orientation:forward strand
Alignment:YTGTTAACAAAG-----
AGAAGAACAAAGGACTA

MA0047.2_Foxa2/Jaspar

Match Rank:7
Score:0.71
Offset:1
Orientation:forward strand
Alignment:YTGTTAACAAAG-
-TGTTTACTTAGG

PB0109.1_Bbx_2/Jaspar

Match Rank:8
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----YTGTTAACAAAG-
NNNNCTGTTAACNNTNN

PB0061.1_Sox11_1/Jaspar

Match Rank:9
Score:0.70
Offset:0
Orientation:forward strand
Alignment:YTGTTAACAAAG-----
ATAAGAACAAAGGACTA

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:10
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-YTGTTAACAAAG
CNTGTTTACATA-