Information for motif9


Reverse Opposite:

p-value:1e-40
log p-value:-9.212e+01
Information Content per bp:1.672
Number of Target Sequences with motif51.0
Percentage of Target Sequences with motif6.05%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.53%
Average Position of motif in Targets91.5 +/- 48.9bp
Average Position of motif in Background162.1 +/- 20.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0111.1_Spz1/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GTTACCCTTT
GCTGTTACCCT--

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GTTACCCTTT----
--TGACCTTTNCNT

ISRE(IRF)/ThioMac-LPS-exp(GSE23622)/HOMER

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GTTACCCTTT-
AGTTTCAGTTTC

MA0051.1_IRF2/Jaspar

Match Rank:4
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------GTTACCCTTT--
GTTTTGCTTTCACTTTCC

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GTTACCCTTT-
RSTTTCRSTTTC

PH0163.1_Six3/Jaspar

Match Rank:6
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------GTTACCCTTT-
ANANGTGATACCCTATN

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GTTACCCTTT-
ACTTTCACTTTC

PB0049.1_Nr2f2_1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GTTACCCTTT----
NNNNTGACCTTTNNNN

PB0053.1_Rara_1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GTTACCCTTT----
NNNGTGACCTTTGNNN

MA0065.2_PPARG::RXRA/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GTTACCCTTT-------
--TGACCTTTGCCCTAN