| p-value: | 1e-34 |
| log p-value: | -7.998e+01 |
| Information Content per bp: | 1.792 |
| Number of Target Sequences with motif | 40.0 |
| Percentage of Target Sequences with motif | 1.26% |
| Number of Background Sequences with motif | 2.6 |
| Percentage of Background Sequences with motif | 0.09% |
| Average Position of motif in Targets | 94.7 +/- 55.9bp |
| Average Position of motif in Background | 50.7 +/- 24.1bp |
| Strand Bias (log2 ratio + to - strand density) | 0.1 |
| Multiplicity (# of sites on avg that occur together) | 1.03 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer
| Match Rank: | 1 |
| Score: | 0.72
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --GAGTGTTAGS
TTGAGTGSTT-- |
|
|
|
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer
| Match Rank: | 2 |
| Score: | 0.72
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---GAGTGTTAGS
CTYRAGTGSY--- |
|
|
|
MA0122.1_Nkx3-2/Jaspar
| Match Rank: | 3 |
| Score: | 0.68
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --GAGTGTTAGS
TTAAGTGGA--- |
|
|
|
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer
| Match Rank: | 4 |
| Score: | 0.67
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | GAGTGTTAGS
AGGTGTGAAM |
|
|
|
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer
| Match Rank: | 5 |
| Score: | 0.66
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | GAGTGTTAGS
AGGTGTCA-- |
|
|
|
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer
| Match Rank: | 6 |
| Score: | 0.66
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --GAGTGTTAGS
TTAAGTGCTT-- |
|
|
|
MA0087.1_Sox5/Jaspar
| Match Rank: | 7 |
| Score: | 0.64
| | Offset: | 1
| | Orientation: | forward strand |
| Alignment: | GAGTGTTAGS
-ATTGTTA-- |
|
|
|
MF0011.1_HMG_class/Jaspar
| Match Rank: | 8 |
| Score: | 0.64
| | Offset: | 1
| | Orientation: | forward strand |
| Alignment: | GAGTGTTAGS
-ATTGTT--- |
|
|
|
PB0165.1_Sox11_2/Jaspar
| Match Rank: | 9 |
| Score: | 0.63
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --GAGTGTTAGS--
AAAATTGTTATGAA |
|
|
|
PB0172.1_Sox1_2/Jaspar
| Match Rank: | 10 |
| Score: | 0.63
| | Offset: | -4
| | Orientation: | forward strand |
| Alignment: | ----GAGTGTTAGS-
CTATAATTGTTAGCG |
|
|
|
