| p-value: | 1e-32 |
| log p-value: | -7.424e+01 |
| Information Content per bp: | 1.449 |
| Number of Target Sequences with motif | 38.0 |
| Percentage of Target Sequences with motif | 1.20% |
| Number of Background Sequences with motif | 2.5 |
| Percentage of Background Sequences with motif | 0.09% |
| Average Position of motif in Targets | 93.1 +/- 51.6bp |
| Average Position of motif in Background | 77.0 +/- 34.7bp |
| Strand Bias (log2 ratio + to - strand density) | -0.2 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
Pax8(Paired/Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
| Match Rank: | 1 |
| Score: | 0.64
| | Offset: | -5
| | Orientation: | forward strand |
| Alignment: | -----GCTAGACTGC
GTCATGCHTGRCTGS |
|
|
|
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
| Match Rank: | 2 |
| Score: | 0.64
| | Offset: | 2
| | Orientation: | forward strand |
| Alignment: | GCTAGACTGC
--TWGTCTGV |
|
|
|
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 3 |
| Score: | 0.61
| | Offset: | 1
| | Orientation: | reverse strand |
| Alignment: | GCTAGACTGC
-CCAGACAG- |
|
|
|
PAX5(Paired/Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer
| Match Rank: | 4 |
| Score: | 0.60
| | Offset: | -6
| | Orientation: | reverse strand |
| Alignment: | ------GCTAGACTGC
NGTCACGCTTGGCTGC |
|
|
|
PB0203.1_Zfp691_2/Jaspar
| Match Rank: | 5 |
| Score: | 0.59
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -GCTAGACTGC------
TACGAGACTCCTCTAAC |
|
|
|
POL002.1_INR/Jaspar
| Match Rank: | 6 |
| Score: | 0.58
| | Offset: | 2
| | Orientation: | reverse strand |
| Alignment: | GCTAGACTGC
--NNNANTGA |
|
|
|
MA0014.2_PAX5/Jaspar
| Match Rank: | 7 |
| Score: | 0.58
| | Offset: | -5
| | Orientation: | reverse strand |
| Alignment: | -----GCTAGACTGC----
GTCACGCTTGGCTGCNCNN |
|
|
|
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 8 |
| Score: | 0.58
| | Offset: | 1
| | Orientation: | reverse strand |
| Alignment: | GCTAGACTGC-
-CCAGACRSVB |
|
|
|
MA0513.1_SMAD2::SMAD3::SMAD4/Jaspar
| Match Rank: | 9 |
| Score: | 0.57
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----GCTAGACTGC
AGGTGNCAGACAG- |
|
|
|
PB0060.1_Smad3_1/Jaspar
| Match Rank: | 10 |
| Score: | 0.56
| | Offset: | -4
| | Orientation: | forward strand |
| Alignment: | ----GCTAGACTGC---
CAAATCCAGACATCACA |
|
|
|
