| p-value: | 1e-32 |
| log p-value: | -7.415e+01 |
| Information Content per bp: | 1.784 |
| Number of Target Sequences with motif | 315.0 |
| Percentage of Target Sequences with motif | 9.92% |
| Number of Background Sequences with motif | 134.9 |
| Percentage of Background Sequences with motif | 4.82% |
| Average Position of motif in Targets | 101.9 +/- 55.4bp |
| Average Position of motif in Background | 95.1 +/- 55.1bp |
| Strand Bias (log2 ratio + to - strand density) | 0.0 |
| Multiplicity (# of sites on avg that occur together) | 1.05 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer
| Match Rank: | 1 |
| Score: | 0.89
| | Offset: | 1
| | Orientation: | forward strand |
| Alignment: | CTAATCCC-
-TAATCCCN |
|
|
|
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer
| Match Rank: | 2 |
| Score: | 0.89
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -CTAATCCC
GCTAATCC- |
|
|
|
PH0139.1_Pitx3/Jaspar
| Match Rank: | 3 |
| Score: | 0.88
| | Offset: | -5
| | Orientation: | reverse strand |
| Alignment: | -----CTAATCCC---
GNNAGCTAATCCCCCN |
|
|
|
PH0015.1_Crx/Jaspar
| Match Rank: | 4 |
| Score: | 0.85
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---CTAATCCC-----
AGGCTAATCCCCAANG |
|
|
|
PH0035.1_Gsc/Jaspar
| Match Rank: | 5 |
| Score: | 0.85
| | Offset: | -5
| | Orientation: | forward strand |
| Alignment: | -----CTAATCCC----
AATCGTTAATCCCTTTA |
|
|
|
PH0137.1_Pitx1/Jaspar
| Match Rank: | 6 |
| Score: | 0.84
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----CTAATCCC-----
NTTGTTAATCCCTCTNN |
|
|
|
MA0467.1_Crx/Jaspar
| Match Rank: | 7 |
| Score: | 0.84
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | CTAATCCC---
CTAATCCTCTT |
|
|
|
PB0185.1_Tcf1_2/Jaspar
| Match Rank: | 8 |
| Score: | 0.83
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -CTAATCCC-----
NNTAATCCNGNCNN |
|
|
|
PH0138.1_Pitx2/Jaspar
| Match Rank: | 9 |
| Score: | 0.83
| | Offset: | -5
| | Orientation: | reverse strand |
| Alignment: | -----CTAATCCC----
GNNNATTAATCCCTNCN |
|
|
|
PH0130.1_Otx2/Jaspar
| Match Rank: | 10 |
| Score: | 0.83
| | Offset: | -5
| | Orientation: | reverse strand |
| Alignment: | -----CTAATCCC----
GANNATTAATCCCTNNN |
|
|
|
