Information for motif18


Reverse Opposite:

p-value:1e-31
log p-value:-7.141e+01
Information Content per bp:1.796
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif1.17%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets90.1 +/- 47.2bp
Average Position of motif in Background110.1 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AAACCCCAGGAA
NAAACCACAG---

MA0002.2_RUNX1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AAACCCCAGGAA
AAACCACAGAN-

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AAACCCCAGGAA
AAACCACAGC--

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AAACCCCAGGAA
AAACCACANN--

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:5
Score:0.62
Offset:5
Orientation:forward strand
Alignment:AAACCCCAGGAA---
-----ACAGGAAGTG

MA0154.2_EBF1/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AAACCCCAGGAA
-GTCCCCAGGGA

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AAACCCCAGGAA
NWAACCACADNN-

MA0511.1_RUNX2/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AAACCCCAGGAA--
CAAACCACAAACCCC

MA0524.1_TFAP2C/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AAACCCCAGGAA-
CATGGCCCCAGGGCA

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:AAACCCCAGGAA--
----ANCAGGATGT