Information for motif20


Reverse Opposite:

p-value:1e-27
log p-value:-6.235e+01
Information Content per bp:1.870
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets82.4 +/- 55.3bp
Average Position of motif in Background78.8 +/- 11.8bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0100.2_Myb/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CAAACTCRCA
CCAACTGCCA

PB0149.1_Myb_2/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CAAACTCRCA---
CGACCAACTGCCATGC

PB0146.1_Mafk_2/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CAAACTCRCA---
GAAAAAATTGCAAGG

PB0024.1_Gcm1_1/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CAAACTCRCA-----
TCGTACCCGCATCATT

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CAAACTCRCA
CCAACTGCCA

MA0592.1_ESRRA/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CAAACTCRCA
CCAAGGTCACA

PB0130.1_Gm397_2/Jaspar

Match Rank:7
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CAAACTCRCA-
AGCGGCACACACGCAA

PB0151.1_Myf6_2/Jaspar

Match Rank:8
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CAAACTCRCA
AGCAACAGCCGCACC

PB0150.1_Mybl1_2/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CAAACTCRCA--
CGACCAACTGCCGTG

MA0164.1_Nr2e3/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CAAACTCRCA
CAAGCTT---