Information for motif25


Reverse Opposite:

p-value:1e-25
log p-value:-5.768e+01
Information Content per bp:1.708
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets99.2 +/- 62.7bp
Average Position of motif in Background53.1 +/- 20.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0080.3_Spi1/Jaspar

Match Rank:1
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--AAAGGGGAAGGG-
AAAAAGAGGAAGTGA

MA0508.1_PRDM1/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AAAGGGGAAGGG-
AGAAAGTGAAAGTGA

PB0058.1_Sfpi1_1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AAAGGGGAAGGG-
TTAAGAGGAAGTTA

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.65
Offset:2
Orientation:forward strand
Alignment:AAAGGGGAAGGG
--AGAGGAAGTG

MA0081.1_SPIB/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AAAGGGGAAGGG
--AGAGGAA---

POL003.1_GC-box/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AAAGGGGAAGGG---
-AGGGGGCGGGGCTG

MA0079.3_SP1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AAAGGGGAAGGG-
--GGGGGCGGGGC

PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AAAGGGGAAGGG
GAAAGTGAAAGT-

PB0128.1_Gcm1_2/Jaspar

Match Rank:9
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----AAAGGGGAAGGG
TGCGCATAGGGGAGGAG

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.61
Offset:4
Orientation:forward strand
Alignment:AAAGGGGAAGGG
----GGGGGGGG