Information for motif26


Reverse Opposite:

p-value:1e-22
log p-value:-5.239e+01
Information Content per bp:1.658
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets109.7 +/- 56.5bp
Average Position of motif in Background46.8 +/- 34.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0132.1_Pdx1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-ATTAGCGCTT
AATTAG-----

PH0097.1_Lhx6_2/Jaspar

Match Rank:2
Score:0.66
Offset:-7
Orientation:forward strand
Alignment:-------ATTAGCGCTT
TCCACTAATTAGCGGTT

PH0107.1_Msx2/Jaspar

Match Rank:3
Score:0.65
Offset:-8
Orientation:forward strand
Alignment:--------ATTAGCGCTT
GAAGACCAATTAGCGCT-

PH0098.1_Lhx8/Jaspar

Match Rank:4
Score:0.65
Offset:-7
Orientation:forward strand
Alignment:-------ATTAGCGCTT
ACCCCTAATTAGCGGTG

PH0155.1_Prrx2/Jaspar

Match Rank:5
Score:0.65
Offset:-8
Orientation:reverse strand
Alignment:--------ATTAGCGCTT
NTTCGCTAATTAGCTNT-

PH0034.1_Gbx2/Jaspar

Match Rank:6
Score:0.64
Offset:-7
Orientation:forward strand
Alignment:-------ATTAGCGCTT
AGCGCTAATTAGCGATT

PH0032.1_Evx2/Jaspar

Match Rank:7
Score:0.63
Offset:-7
Orientation:reverse strand
Alignment:-------ATTAGCGCTT
ANCGCTAATTAGCGGTN

MA0158.1_HOXA5/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ATTAGCGCTT
AATTAGTG---

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ATTAGCGCTT
ATTAACACCT

PH0027.1_Emx2/Jaspar

Match Rank:10
Score:0.62
Offset:-8
Orientation:reverse strand
Alignment:--------ATTAGCGCTT
NNCCACTAATTAGNNNT-