Information for motif27


Reverse Opposite:

p-value:1e-22
log p-value:-5.225e+01
Information Content per bp:1.956
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets102.3 +/- 51.4bp
Average Position of motif in Background138.3 +/- 38.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0076.1_Sp4_1/Jaspar

Match Rank:1
Score:0.82
Offset:-5
Orientation:forward strand
Alignment:-----CGCCCCCA----
GGTCCCGCCCCCTTCTC

PB0010.1_Egr1_1/Jaspar

Match Rank:2
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--CGCCCCCA----
TCCGCCCCCGCATT

MA0162.2_EGR1/Jaspar

Match Rank:3
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----CGCCCCCA--
CCCCCGCCCCCGCC

PB0100.1_Zfp740_1/Jaspar

Match Rank:4
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----CGCCCCCA----
CCCCCCCCCCCACTTG

MA0155.1_INSM1/Jaspar

Match Rank:5
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:CGCCCCCA----
CGCCCCCTGACA

PB0201.1_Zfp281_2/Jaspar

Match Rank:6
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----CGCCCCCA-----
AGGAGACCCCCAATTTG

MA0079.3_SP1/Jaspar

Match Rank:7
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----CGCCCCCA
GCCCCGCCCCC-

Sp1(Zf)/Promoter/Homer

Match Rank:8
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----CGCCCCCA
GGCCCCGCCCCC-

Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:9
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CGCCCCCA--
YCCGCCCACGCN

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CGCCCCCA--
CRCCCACGCA