Information for motif3


Reverse Opposite:

p-value:1e-55
log p-value:-1.286e+02
Information Content per bp:1.780
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif1.45%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets84.6 +/- 53.0bp
Average Position of motif in Background106.9 +/- 42.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0522.1_Tcf3/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TCCCAGCTCCTG
-CACAGCTGCAG

ETS:RUNX/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TCCCAGCTCCTG-
-ACCACATCCTGT

Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TCCCAGCTCCTG
--NCAGCTGCTG

MA0098.2_Ets1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TCCCAGCTCCTG----
-CCCACTTCCTGTCTC

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.59
Offset:5
Orientation:forward strand
Alignment:TCCCAGCTCCTG
-----GCTCCG-

MA0516.1_SP2/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TCCCAGCTCCTG--
GCCCCGCCCCCTCCC

MA0048.1_NHLH1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TCCCAGCTCCTG
GCGCAGCTGCGT

PB0003.1_Ascl2_1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TCCCAGCTCCTG---
CTCAGCAGCTGCTACTG

MA0079.3_SP1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TCCCAGCTCCTG
GCCCCGCCCCC--

MA0500.1_Myog/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TCCCAGCTCCTG
NNGCAGCTGTC-