Information for motif30


Reverse Opposite:

p-value:1e-21
log p-value:-4.980e+01
Information Content per bp:1.777
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets128.1 +/- 58.3bp
Average Position of motif in Background69.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:1
Score:0.75
Offset:1
Orientation:forward strand
Alignment:GTGRCGGT
-TGACGT-

PB0164.1_Smad3_2/Jaspar

Match Rank:2
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----GTGRCGGT-----
NAGANTGGCGGGGNGNA

MA0018.2_CREB1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GTGRCGGT-
-TGACGTCA

CRE(bZIP)/Promoter/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTGRCGGT----
GTGACGTCACCG

PB0108.1_Atf1_2/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GTGRCGGT----
GAATGACGAATAAC

MA0067.1_Pax2/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GTGRCGGT
NCGTGACN--

PB0113.1_E2F3_2/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GTGRCGGT-----
NNNNTTGGCGCCGANNN

PB0112.1_E2F2_2/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GTGRCGGT-----
NNNNTTGGCGCCGANNN

PB0045.1_Myb_1/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GTGRCGGT------
NNNNTAACGGTTNNNAN

PB0046.1_Mybl1_1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GTGRCGGT------
NNANTAACGGTTNNNAN