Information for motif31


Reverse Opposite:

p-value:1e-21
log p-value:-4.980e+01
Information Content per bp:1.882
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets98.7 +/- 54.6bp
Average Position of motif in Background112.6 +/- 48.5bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0516.1_SP2/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CCGCCTTM----
GCCCCGCCCCCTCCC

PB0180.1_Sp4_2/Jaspar

Match Rank:2
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------CCGCCTTM-
NNGGCCACGCCTTTN

PB0164.1_Smad3_2/Jaspar

Match Rank:3
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------CCGCCTTM---
TACGCCCCGCCACTCTG

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----CCGCCTTM
DTTTCCCGCC---

MA0471.1_E2F6/Jaspar

Match Rank:5
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----CCGCCTTM
NCTTCCCGCCC--

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:6
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCGCCTTM
TTCCCGCCWG-

MA0470.1_E2F4/Jaspar

Match Rank:7
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----CCGCCTTM
NNTTCCCGCCC--

MA0079.3_SP1/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CCGCCTTM
GCCCCGCCCCC

MA0024.2_E2F1/Jaspar

Match Rank:9
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CCGCCTTM
CCTCCCGCCCN-

YY1(Zf)/Promoter/Homer

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CCGCCTTM---
GCCGCCATCTTG