Information for motif35


Reverse Opposite:

p-value:1e-17
log p-value:-4.095e+01
Information Content per bp:1.763
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets113.0 +/- 58.3bp
Average Position of motif in Background54.4 +/- 11.9bp
Strand Bias (log2 ratio + to - strand density)2.4
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0161.1_Rxra_2/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---ACTAACTTCG---
NNNNCAACCTTCGNGA

PB0159.1_Rfx4_2/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ACTAACTTCG---
NNNGTAACTANGNNA

MA0109.1_Hltf/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:ACTAACTTCG--
--AACCTTATAT

MA0132.1_Pdx1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ACTAACTTCG
-CTAATT---

MA0075.1_Prrx2/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:ACTAACTTCG
--TAATT---

PB0149.1_Myb_2/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ACTAACTTCG----
CGACCAACTGCCATGC

POL008.1_DCE_S_I/Jaspar

Match Rank:7
Score:0.56
Offset:4
Orientation:forward strand
Alignment:ACTAACTTCG
----GCTTCC

PB0081.1_Tcf1_1/Jaspar

Match Rank:8
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----ACTAACTTCG--
ACTTAGTTAACTAAAAA

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--ACTAACTTCG
NNACTTACCTN-

PH0039.1_Mnx1/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----ACTAACTTCG--
NNNCACTAATTANTNN