Information for motif38


Reverse Opposite:

p-value:1e-15
log p-value:-3.570e+01
Information Content per bp:1.924
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets105.9 +/- 52.6bp
Average Position of motif in Background111.5 +/- 41.7bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GCCGGGCC
AGCGCGCC

Sp1(Zf)/Promoter/Homer

Match Rank:2
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GCCGGGCC
GGGGGCGGGGCC

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GCCGGGCC-
-CTAGGCCT

MA0146.2_Zfx/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GCCGGGCC---
CAGGCCNNGGCCNN

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GCCGGGCC-
-CNAGGCCT

PB0153.1_Nr2f2_2/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCCGGGCC-----
CGCGCCGGGTCACGTA

PB0199.1_Zfp161_2/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCCGGGCC------
GCCGCGCAGTGCGT

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCCGGGCC--
GCCMCRCCCH

PB0180.1_Sp4_2/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GCCGGGCC----
NNGGCCACGCCTTTN

MA0039.2_Klf4/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCCGGGCC--
GCCCCACCCA