Information for motif39


Reverse Opposite:

p-value:1e-15
log p-value:-3.500e+01
Information Content per bp:1.530
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets96.5 +/- 50.7bp
Average Position of motif in Background124.5 +/- 41.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0160.1_NR4A2/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CGAGATCACCCG
-AAGGTCAC---

MA0595.1_SREBF1/Jaspar

Match Rank:2
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CGAGATCACCCG--
----ATCACCCCAC

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CGAGATCACCCG---
CATAAGACCACCATTAC

GLI3(Zf)/GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CGAGATCACCCG--
--GGACCACCCACG

PH0016.1_Cux1_1/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CGAGATCACCCG--
TNAGNTGATCAACCGGT

PH0037.1_Hdx/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CGAGATCACCCG-
AAGGCGAAATCATCGCA

MA0596.1_SREBF2/Jaspar

Match Rank:7
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CGAGATCACCCG--
----ATCACCCCAT

MA0592.1_ESRRA/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CGAGATCACCCG
CCAAGGTCACA--

PB0138.1_Irf4_2/Jaspar

Match Rank:9
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----CGAGATCACCCG
GNNACCGAGAATNNN--

PB0139.1_Irf5_2/Jaspar

Match Rank:10
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CGAGATCACCCG
TTGACCGAGAATTCC--