Information for motif43


Reverse Opposite:

p-value:1e-12
log p-value:-2.957e+01
Information Content per bp:1.753
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif8.5
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets115.4 +/- 53.2bp
Average Position of motif in Background83.9 +/- 52.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0001.1_ETS_class/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CTCCGGTA
CTTCCGGT-

PB0020.1_Gabpa_1/Jaspar

Match Rank:2
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------CTCCGGTA---
NNNNACTTCCGGTATNN

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---CTCCGGTA
NRYTTCCGGY-

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:4
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CTCCGGTA
NRYTTCCGGH-

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CTCCGGTA
GCTCCG---

MA0028.1_ELK1/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CTCCGGTA-
CTTCCGGNNN

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CTCCGGTA
HACTTCCGGY-

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CTCCGGTA
ACATCCTGNT

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:9
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CTCCGGTA
ACTTCCGGTT

MA0076.2_ELK4/Jaspar

Match Rank:10
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CTCCGGTA
CCACTTCCGGC-