Information for motif44


Reverse Opposite:

p-value:1e-12
log p-value:-2.957e+01
Information Content per bp:1.860
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif8.8
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets91.2 +/- 50.2bp
Average Position of motif in Background102.3 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0038.1_Gfi1/Jaspar

Match Rank:1
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---TGATTCGA
CNGTGATTTN-

MA0502.1_NFYB/Jaspar

Match Rank:2
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TGATTCGA------
CTGATTGGTCNATTT

MA0060.2_NFYA/Jaspar

Match Rank:3
Score:0.71
Offset:-7
Orientation:forward strand
Alignment:-------TGATTCGA---
AGAGTGCTGATTGGTCCA

PH0026.1_Duxbl/Jaspar

Match Rank:4
Score:0.71
Offset:-6
Orientation:reverse strand
Alignment:------TGATTCGA---
NNNNGTTGATTGGGTCG

MA0468.1_DUX4/Jaspar

Match Rank:5
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TGATTCGA---
TGATTAAATTA

PH0014.1_Cphx/Jaspar

Match Rank:6
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TGATTCGA----
NTTGATTNNATCAN

POL004.1_CCAAT-box/Jaspar

Match Rank:7
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGATTCGA----
TGATTGGCTANN

NFY(CCAAT)/Promoter/Homer

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TGATTCGA-
CCGATTGGCT

PH0037.1_Hdx/Jaspar

Match Rank:9
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TGATTCGA----
TNNNATGATTTCNNCNN

PH0134.1_Pbx1/Jaspar

Match Rank:10
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------TGATTCGA--
NNNNNATTGATGNGTGN