Information for motif5


Reverse Opposite:

p-value:1e-53
log p-value:-1.227e+02
Information Content per bp:1.610
Number of Target Sequences with motif822.0
Percentage of Target Sequences with motif25.90%
Number of Background Sequences with motif427.3
Percentage of Background Sequences with motif15.27%
Average Position of motif in Targets100.0 +/- 54.5bp
Average Position of motif in Background98.9 +/- 68.8bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:TCGCACCT
TGACACCT

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:2
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--TCGCACCT
KTTCACACCT

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:3
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--TCGCACCT
ATTAACACCT

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:4
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---TCGCACCT------
NNTNCGCACCTGTNGAN

PB0013.1_Eomes_1/Jaspar

Match Rank:5
Score:0.79
Offset:-5
Orientation:reverse strand
Alignment:-----TCGCACCT----
NNTTTTCACACCTTNNN

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.79
Offset:1
Orientation:forward strand
Alignment:TCGCACCT---
-NNCACCTGNN

MA0009.1_T/Jaspar

Match Rank:7
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-TCGCACCT--
TTCACACCTAG

MA0103.2_ZEB1/Jaspar

Match Rank:8
Score:0.75
Offset:0
Orientation:forward strand
Alignment:TCGCACCT-
CCTCACCTG

MA0513.1_SMAD2::SMAD3::SMAD4/Jaspar

Match Rank:9
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----TCGCACCT
CTGTCTGTCACCT

E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:10
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TCGCACCT--
NNACAGCTGC