Information for motif8


Reverse Opposite:

p-value:1e-43
log p-value:-9.934e+01
Information Content per bp:1.668
Number of Target Sequences with motif367.0
Percentage of Target Sequences with motif11.56%
Number of Background Sequences with motif147.5
Percentage of Background Sequences with motif5.27%
Average Position of motif in Targets98.5 +/- 53.1bp
Average Position of motif in Background101.1 +/- 59.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0097.1_Lhx6_2/Jaspar

Match Rank:1
Score:0.84
Offset:-4
Orientation:forward strand
Alignment:----CTAATTAGCA---
TCCACTAATTAGCGGTT

PH0098.1_Lhx8/Jaspar

Match Rank:2
Score:0.84
Offset:-4
Orientation:forward strand
Alignment:----CTAATTAGCA---
ACCCCTAATTAGCGGTG

PH0032.1_Evx2/Jaspar

Match Rank:3
Score:0.83
Offset:-4
Orientation:reverse strand
Alignment:----CTAATTAGCA---
ANCGCTAATTAGCGGTN

PH0155.1_Prrx2/Jaspar

Match Rank:4
Score:0.83
Offset:-5
Orientation:reverse strand
Alignment:-----CTAATTAGCA--
NTTCGCTAATTAGCTNT

PH0131.1_Pax4/Jaspar

Match Rank:5
Score:0.82
Offset:-4
Orientation:forward strand
Alignment:----CTAATTAGCA---
TGAACTAATTAGCCCAC

PH0034.1_Gbx2/Jaspar

Match Rank:6
Score:0.81
Offset:-5
Orientation:reverse strand
Alignment:-----CTAATTAGCA--
AANCGCTAATTAGCNNN

PH0031.1_Evx1/Jaspar

Match Rank:7
Score:0.81
Offset:-4
Orientation:forward strand
Alignment:----CTAATTAGCA---
AGAACTAATTAGTGGAC

Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer

Match Rank:8
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-CTAATTAGCA
NCTAATTA---

PH0089.1_Isx/Jaspar

Match Rank:9
Score:0.80
Offset:-4
Orientation:reverse strand
Alignment:----CTAATTAGCA--
ACNNCTAATTAGNNNN

PB0031.1_Hoxa3_1/Jaspar

Match Rank:10
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-CTAATTAGCA---
GTTAATTANCTCNN