Information for motif16


Reverse Opposite:

p-value:1e-9
log p-value:-2.144e+01
Information Content per bp:1.830
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif14.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets106.3 +/- 50.2bp
Average Position of motif in Background78.4 +/- 44.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0195.1_Zbtb3_2/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AAACACTGGGCT---
CAATCACTGGCAGAAT

MA0077.1_SOX9/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AAACACTGGGCT
GAACAATGG---

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AAACACTGGGCT
GAACAATGGN--

MA0515.1_Sox6/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AAACACTGGGCT
AAAACAATGG---

MA0143.3_Sox2/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AAACACTGGGCT
-AACAAAGG---

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AAACACTGGGCT
AAATCACTGC---

MA0038.1_Gfi1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AAACACTGGGCT
CAAATCACTG----

MA0157.1_FOXO3/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AAACACTGGGCT
TGTAAACA-------

MA0087.1_Sox5/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AAACACTGGGCT
NAACAAT-----

PB0132.1_Hbp1_2/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AAACACTGGGCT--
NNTNNACAATGGGANNN