Information for motif20


Reverse Opposite:

p-value:1e-7
log p-value:-1.648e+01
Information Content per bp:1.765
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif187.9
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets92.4 +/- 49.1bp
Average Position of motif in Background102.7 +/- 58.7bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0203.1_Zfp691_2/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-RGGTGRCTCC------
TACGAGACTCCTCTAAC

PB0117.1_Eomes_2/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----RGGTGRCTCC--
GCGGAGGTGTCGCCTC

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.66
Offset:5
Orientation:forward strand
Alignment:RGGTGRCTCC-
-----GCTCCG

PB0113.1_E2F3_2/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--RGGTGRCTCC-----
NNNNTTGGCGCCGANNN

PB0112.1_E2F2_2/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--RGGTGRCTCC-----
NNNNTTGGCGCCGANNN

MA0477.1_FOSL1/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:RGGTGRCTCC--
-GGTGACTCATG

MA0478.1_FOSL2/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:RGGTGRCTCC-
GGATGACTCAT

PB0057.1_Rxra_1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--RGGTGRCTCC-----
TGTCGTGACCCCTTAAT

MA0490.1_JUNB/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:RGGTGRCTCC-
GGATGACTCAT

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:RGGTGRCTCC-
---TGACACCT