Information for motif22


Reverse Opposite:

p-value:1e-6
log p-value:-1.514e+01
Information Content per bp:1.966
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.22%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets112.4 +/- 73.2bp
Average Position of motif in Background86.5 +/- 70.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0025.1_NFIL3/Jaspar

Match Rank:1
Score:0.88
Offset:0
Orientation:forward strand
Alignment:TTATGTAAGG-
TTATGTAACAT

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:2
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TTATGTAAGG
TTATGCAAT-

MA0043.1_HLF/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TTATGTAAGG
NATTACGTAACC

MA0102.3_CEBPA/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TTATGTAAGG
NATTGTGCAAT-

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:5
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TTATGTAAGG
ATGATGCAAT-

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TTATGTAAGG
MTGATGCAAT-

MA0033.1_FOXL1/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TTATGTAAGG
-TATGTNTA-

MA0124.1_NKX3-1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TTATGTAAGG
-TAAGTAT--

MA0466.1_CEBPB/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TTATGTAAGG
ATTGTGCAATA

PH0173.1_Uncx/Jaspar

Match Rank:10
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TTATGTAAGG--
CATAATTAATTAACGCG