Information for motif24


Reverse Opposite:

p-value:1e-6
log p-value:-1.486e+01
Information Content per bp:1.955
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.16%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets104.4 +/- 43.0bp
Average Position of motif in Background36.4 +/- 8.8bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGCCCAATGCAG----
AATCGCACTGCATTCCG

PB0133.1_Hic1_2/Jaspar

Match Rank:2
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----AGCCCAATGCAG
GGGTGTGCCCAAAAGG-

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGCCCAATGCAG
-AGCCAATCGG-

MA0078.1_Sox17/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AGCCCAATGCAG
--GACAATGNN-

PB0134.1_Hnf4a_2/Jaspar

Match Rank:5
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------AGCCCAATGCAG
GGCAAAAGTCCAATAA--

POL004.1_CCAAT-box/Jaspar

Match Rank:6
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AGCCCAATGCAG
ACTAGCCAATCA--

PH0026.1_Duxbl/Jaspar

Match Rank:7
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-AGCCCAATGCAG----
CGACCCAATCAACGGTG

PB0132.1_Hbp1_2/Jaspar

Match Rank:8
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--AGCCCAATGCAG---
TGTTCCCATTGTGTACT

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:9
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--AGCCCAATGCAG-
ATTGCCTCAGGCAAT

MA0515.1_Sox6/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:AGCCCAATGCAG
AAAACAATGG--