Information for motif27


Reverse Opposite:

p-value:1e-4
log p-value:-9.738e+00
Information Content per bp:1.530
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif106.0
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets103.2 +/- 46.4bp
Average Position of motif in Background103.6 +/- 57.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---TGCTATAC-
AGATGCAATCCC

PB0106.1_Arid5a_2/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TGCTATAC-------
CATACAATACGAAATAA

MA0032.1_FOXC1/Jaspar

Match Rank:3
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:TGCTATAC-----
-----TACTNNNN

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:4
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TGCTATAC--
NCCGTTGCTANGNGN

Tbox:Smad/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TGCTATAC-
AGGTGHCAGACA

MA0033.1_FOXL1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TGCTATAC
TATACATA-

PB0055.1_Rfx4_1/Jaspar

Match Rank:7
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TGCTATAC--
NNCGTTGCTATGGNN

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGCTATAC
NGCTN---

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TGCTATAC-
TTGCAACATN

MA0466.1_CEBPB/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TGCTATAC
ATTGTGCAATA-