Information for motif7


Reverse Opposite:

p-value:1e-16
log p-value:-3.834e+01
Information Content per bp:1.867
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif22.7
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets98.8 +/- 47.5bp
Average Position of motif in Background88.1 +/- 58.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0180.1_Sp4_2/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GCCCCTCCTTTG
NNGGCCACGCCTTTN

MA0599.1_KLF5/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GCCCCTCCTTTG
GCCCCGCCCC--

MA0079.3_SP1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GCCCCTCCTTTG
GCCCCGCCCCC-

POL003.1_GC-box/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCCCCTCCTTTG
NAGCCCCGCCCCCN

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GCCCCTCCTTTG
GCCMCRCCCH--

MA0057.1_MZF1_5-13/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GCCCCTCCTTTG
TTCCCCCTAC----

MA0516.1_SP2/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCCCCTCCTTTG---
GCCCCGCCCCCTCCC

MA0039.2_Klf4/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCCCCTCCTTTG
GCCCCACCCA--

MA0143.3_Sox2/Jaspar

Match Rank:9
Score:0.60
Offset:6
Orientation:forward strand
Alignment:GCCCCTCCTTTG--
------CCTTTGTT

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCCCCTCCTTTG
CCCCCTGCTGTG