Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 3174)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 46506)	% of Background Sequences with Motif
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e-107	-2.468e+02	0.0000	691.0	21.77%	4111.1	8.84%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e-99	-2.290e+02	0.0000	580.0	18.27%	3223.4	6.93%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e-91	-2.114e+02	0.0000	534.0	16.82%	2949.6	6.34%
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e-63	-1.460e+02	0.0000	162.0	5.10%	444.1	0.95%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e-56	-1.299e+02	0.0000	187.0	5.89%	664.8	1.43%
Fox:Ebox(Forkhead:HLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e-52	-1.212e+02	0.0000	581.0	18.30%	4389.4	9.43%
Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e-48	-1.112e+02	0.0000	425.0	13.39%	2886.4	6.20%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e-45	-1.057e+02	0.0000	272.0	8.57%	1488.1	3.20%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e-37	-8.659e+01	0.0000	946.0	29.80%	9372.5	20.14%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e-27	-6.394e+01	0.0000	447.0	14.08%	3821.0	8.21%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e-25	-5.919e+01	0.0000	1353.0	42.63%	15625.2	33.58%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e-23	-5.487e+01	0.0000	621.0	19.57%	6093.8	13.10%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e-23	-5.317e+01	0.0000	428.0	13.48%	3815.0	8.20%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e-22	-5.205e+01	0.0000	927.0	29.21%	10094.6	21.70%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e-22	-5.186e+01	0.0000	305.0	9.61%	2449.2	5.26%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e-19	-4.594e+01	0.0000	273.0	8.60%	2199.1	4.73%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer	CTGTTTAC	1e-19	-4.575e+01	0.0000	772.0	24.32%	8271.9	17.78%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e-18	-4.372e+01	0.0000	475.0	14.97%	4589.9	9.87%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e-17	-4.104e+01	0.0000	566.0	17.83%	5786.7	12.44%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e-17	-4.023e+01	0.0000	878.0	27.66%	9858.9	21.19%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e-13	-3.050e+01	0.0000	650.0	20.48%	7215.4	15.51%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e-12	-2.848e+01	0.0000	566.0	17.83%	6197.4	13.32%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e-10	-2.487e+01	0.0000	1427.0	44.96%	18214.9	39.15%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e-10	-2.475e+01	0.0000	131.0	4.13%	1019.1	2.19%
Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e-10	-2.312e+01	0.0000	153.0	4.82%	1286.2	2.76%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e-9	-2.256e+01	0.0000	1416.0	44.61%	18196.2	39.11%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e-9	-2.222e+01	0.0000	323.0	10.18%	3325.9	7.15%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e-9	-2.183e+01	0.0000	709.0	22.34%	8371.5	17.99%
Ptf1a(HLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e-9	-2.083e+01	0.0000	1050.0	33.08%	13114.2	28.19%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e-8	-1.969e+01	0.0000	180.0	5.67%	1666.7	3.58%
E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e-8	-1.924e+01	0.0000	599.0	18.87%	7020.3	15.09%
E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e-7	-1.835e+01	0.0000	613.0	19.31%	7252.2	15.59%
SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e-7	-1.650e+01	0.0000	1674.0	52.74%	22355.6	48.05%
Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e-7	-1.640e+01	0.0000	91.0	2.87%	729.3	1.57%
OCT4-SOX2-TCF-NANOG((POU/Homeobox/HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e-7	-1.621e+01	0.0000	60.0	1.89%	411.4	0.88%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e-6	-1.604e+01	0.0000	109.0	3.43%	933.0	2.01%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e-6	-1.593e+01	0.0000	486.0	15.31%	5675.8	12.20%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e-5	-1.380e+01	0.0000	605.0	19.06%	7392.2	15.89%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e-5	-1.362e+01	0.0000	165.0	5.20%	1646.7	3.54%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e-5	-1.228e+01	0.0000	698.0	21.99%	8765.1	18.84%
Tbox:Smad/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e-5	-1.199e+01	0.0000	95.0	2.99%	859.5	1.85%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e-4	-1.067e+01	0.0001	236.0	7.44%	2642.0	5.68%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e-4	-1.045e+01	0.0002	505.0	15.91%	6237.8	13.41%
Pax7-long(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e-4	-1.037e+01	0.0002	13.0	0.41%	47.2	0.10%
Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e-4	-9.949e+00	0.0003	404.0	12.73%	4899.7	10.53%
PAX3:FKHR-fusion(Paired/Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e-4	-9.645e+00	0.0003	69.0	2.17%	613.2	1.32%
Oct4:Sox17/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e-4	-9.603e+00	0.0004	50.0	1.58%	403.3	0.87%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e-3	-8.867e+00	0.0007	368.0	11.59%	4479.5	9.63%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e-3	-8.668e+00	0.0009	401.0	12.63%	4938.0	10.61%
bZIP:IRF/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e-3	-8.554e+00	0.0009	121.0	3.81%	1264.7	2.72%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e-3	-8.403e+00	0.0011	75.0	2.36%	711.9	1.53%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e-3	-8.340e+00	0.0011	374.0	11.78%	4593.4	9.87%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e-3	-8.296e+00	0.0012	199.0	6.27%	2267.8	4.87%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e-3	-7.896e+00	0.0017	260.0	8.19%	3089.2	6.64%
Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e-3	-7.683e+00	0.0021	472.0	14.87%	5978.4	12.85%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e-3	-7.374e+00	0.0028	191.0	6.02%	2206.1	4.74%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e-3	-7.283e+00	0.0030	185.0	5.83%	2132.6	4.58%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e-2	-6.845e+00	0.0045	40.0	1.26%	343.1	0.74%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e-2	-6.615e+00	0.0056	144.0	4.54%	1630.6	3.50%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e-2	-6.540e+00	0.0059	68.0	2.14%	677.4	1.46%
GATA-DR4(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e-2	-6.225e+00	0.0080	31.0	0.98%	255.2	0.55%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e-2	-6.030e+00	0.0095	510.0	16.07%	6642.1	14.28%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e-2	-5.989e+00	0.0098	90.0	2.84%	966.8	2.08%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e-2	-5.969e+00	0.0098	35.0	1.10%	304.8	0.66%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e-2	-5.879e+00	0.0106	73.0	2.30%	758.5	1.63%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e-2	-5.736e+00	0.0120	436.0	13.74%	5638.5	12.12%
CTCF-SatelliteElement/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e-2	-5.578e+00	0.0139	11.0	0.35%	61.0	0.13%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e-2	-5.555e+00	0.0140	307.0	9.67%	3873.9	8.33%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e-2	-5.550e+00	0.0140	94.0	2.96%	1033.8	2.22%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e-2	-5.382e+00	0.0162	759.0	23.91%	10220.8	21.97%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e-2	-5.339e+00	0.0166	1032.0	32.51%	14131.0	30.37%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e-2	-5.159e+00	0.0196	362.0	11.41%	4663.0	10.02%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e-2	-5.117e+00	0.0202	314.0	9.89%	4003.3	8.60%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e-2	-5.097e+00	0.0203	64.0	2.02%	672.3	1.44%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e-2	-5.081e+00	0.0204	32.0	1.01%	288.2	0.62%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e-2	-4.986e+00	0.0221	116.0	3.65%	1341.9	2.88%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e-2	-4.901e+00	0.0238	131.0	4.13%	1542.9	3.32%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e-2	-4.750e+00	0.0273	663.0	20.89%	8930.8	19.20%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e-2	-4.628e+00	0.0304	175.0	5.51%	2145.0	4.61%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e-1	-4.580e+00	0.0315	286.0	9.01%	3661.7	7.87%
Pax7(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e-1	-4.572e+00	0.0315	26.0	0.82%	230.7	0.50%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e-1	-4.467e+00	0.0345	6.0	0.19%	27.8	0.06%
GATA-DR8(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e-1	-4.413e+00	0.0359	22.0	0.69%	188.0	0.40%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e-1	-4.377e+00	0.0368	490.0	15.44%	6526.4	14.03%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e-1	-4.300e+00	0.0393	67.0	2.11%	738.7	1.59%
Srebp1a(HLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e-1	-4.282e+00	0.0395	75.0	2.36%	842.0	1.81%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e-1	-4.137e+00	0.0452	394.0	12.41%	5203.2	11.18%
FOXA1:AR/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e-1	-4.122e+00	0.0453	20.0	0.63%	171.8	0.37%
E-box(HLH)/Promoter/Homer	SSGGTCACGTGA	1e-1	-4.067e+00	0.0473	20.0	0.63%	172.4	0.37%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e-1	-4.061e+00	0.0473	83.0	2.61%	954.8	2.05%
NF1:FOXA1/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e-1	-4.058e+00	0.0473	19.0	0.60%	161.8	0.35%
USF1(HLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e-1	-4.003e+00	0.0488	124.0	3.91%	1499.0	3.22%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e-1	-3.840e+00	0.0569	73.0	2.30%	834.8	1.79%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e-1	-3.795e+00	0.0589	235.0	7.40%	3023.1	6.50%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e-1	-3.762e+00	0.0602	208.0	6.55%	2654.1	5.70%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e-1	-3.748e+00	0.0604	541.0	17.04%	7321.2	15.74%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e-1	-3.727e+00	0.0610	39.0	1.23%	406.1	0.87%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e-1	-3.689e+00	0.0627	734.0	23.13%	10081.8	21.67%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e-1	-3.611e+00	0.0672	87.0	2.74%	1028.9	2.21%
Pax8(Paired/Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e-1	-3.549e+00	0.0707	112.0	3.53%	1364.1	2.93%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e-1	-3.533e+00	0.0712	186.0	5.86%	2370.1	5.09%
PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e-1	-3.507e+00	0.0723	150.0	4.73%	1880.8	4.04%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e-1	-3.466e+00	0.0746	57.0	1.80%	643.0	1.38%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e-1	-3.423e+00	0.0772	362.0	11.41%	4830.6	10.38%
GLI3(Zf)/GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e-1	-3.367e+00	0.0808	46.0	1.45%	506.3	1.09%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e-1	-3.343e+00	0.0820	62.0	1.95%	713.7	1.53%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e-1	-3.281e+00	0.0865	248.0	7.81%	3249.9	6.99%
HNF4a(NR/DR1)/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e-1	-3.192e+00	0.0936	159.0	5.01%	2026.4	4.36%
ISRE(IRF)/ThioMac-LPS-exp(GSE23622)/HOMER	AGTTTCASTTTC	1e-1	-3.182e+00	0.0937	17.0	0.54%	155.3	0.33%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e-1	-3.134e+00	0.0974	28.0	0.88%	288.5	0.62%
MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e-1	-2.968e+00	0.1139	402.0	12.67%	5449.8	11.71%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e-1	-2.956e+00	0.1143	243.0	7.66%	3211.5	6.90%
Usf2(HLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e-1	-2.950e+00	0.1143	87.0	2.74%	1064.4	2.29%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e-1	-2.824e+00	0.1281	74.0	2.33%	897.6	1.93%
Srebp2(HLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e-1	-2.786e+00	0.1319	47.0	1.48%	543.0	1.17%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e-1	-2.686e+00	0.1445	547.0	17.23%	7555.9	16.24%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e-1	-2.645e+00	0.1493	228.0	7.18%	3033.3	6.52%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e-1	-2.578e+00	0.1583	418.0	13.17%	5729.3	12.31%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e-1	-2.575e+00	0.1583	151.0	4.76%	1966.9	4.23%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e-1	-2.565e+00	0.1583	18.0	0.57%	181.5	0.39%
CLOCK(HLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e-1	-2.494e+00	0.1679	144.0	4.54%	1876.1	4.03%
FXR(NR/IR1)/Liver-FXR-ChIP-Seq(Chong et al.)/Homer	AGGTCANTGACCTB	1e-1	-2.477e+00	0.1693	128.0	4.03%	1656.4	3.56%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e-1	-2.400e+00	0.1815	730.0	23.00%	10235.6	22.00%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e-1	-2.355e+00	0.1883	488.0	15.37%	6763.5	14.54%
PAX5(Paired/Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e-1	-2.325e+00	0.1925	109.0	3.43%	1406.5	3.02%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e0	-2.278e+00	0.2001	196.0	6.18%	2623.8	5.64%
Max(HLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e0	-2.252e+00	0.2037	176.0	5.55%	2345.2	5.04%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e0	-2.219e+00	0.2090	260.0	8.19%	3533.4	7.59%
NFAT:AP1/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e0	-2.197e+00	0.2119	45.0	1.42%	543.7	1.17%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer	GCTGTGGTTW	1e0	-2.113e+00	0.2287	246.0	7.75%	3349.0	7.20%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e0	-2.101e+00	0.2298	145.0	4.57%	1926.6	4.14%
MyoD(HLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e0	-2.063e+00	0.2368	283.0	8.92%	3880.4	8.34%
ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e0	-2.044e+00	0.2394	583.0	18.37%	8183.2	17.59%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e0	-2.014e+00	0.2451	922.0	29.05%	13095.0	28.15%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e0	-2.001e+00	0.2464	454.0	14.30%	6335.5	13.62%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e0	-1.992e+00	0.2469	382.0	12.04%	5304.7	11.40%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan et al.)/Homer	CCATATATGGNM	1e0	-1.989e+00	0.2469	84.0	2.65%	1087.1	2.34%
GATA-IR4(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e0	-1.986e+00	0.2469	22.0	0.69%	249.8	0.54%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e0	-1.974e+00	0.2469	152.0	4.79%	2038.0	4.38%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e0	-1.916e+00	0.2587	242.0	7.62%	3317.4	7.13%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e0	-1.905e+00	0.2597	204.0	6.43%	2779.4	5.97%
TRa(NR)/C17.2-TRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e0	-1.879e+00	0.2647	136.0	4.28%	1822.8	3.92%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer	MACAGGAAGT	1e0	-1.854e+00	0.2695	106.0	3.34%	1404.9	3.02%
GATA:SCL/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e0	-1.849e+00	0.2695	38.0	1.20%	467.0	1.00%
Reverb(NR/DR2)/BLRP(RAW)-Reverba-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e0	-1.826e+00	0.2731	45.0	1.42%	563.1	1.21%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e0	-1.756e+00	0.2910	104.0	3.28%	1385.6	2.98%
ETS:E-box/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e0	-1.747e+00	0.2917	31.0	0.98%	378.2	0.81%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e0	-1.725e+00	0.2961	74.0	2.33%	969.6	2.08%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e0	-1.712e+00	0.2981	14.0	0.44%	155.8	0.33%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e0	-1.708e+00	0.2981	174.0	5.48%	2378.2	5.11%
GATA-IR3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e0	-1.701e+00	0.2981	38.0	1.20%	475.4	1.02%
c-Myc/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e0	-1.651e+00	0.3104	126.0	3.97%	1705.3	3.67%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e0	-1.618e+00	0.3187	32.0	1.01%	398.2	0.86%
n-Myc(HLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e0	-1.613e+00	0.3187	174.0	5.48%	2390.9	5.14%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e0	-1.612e+00	0.3187	116.0	3.65%	1568.3	3.37%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e0	-1.600e+00	0.3187	180.0	5.67%	2477.5	5.33%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e0	-1.576e+00	0.3241	28.0	0.88%	346.1	0.74%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e0	-1.548e+00	0.3312	52.0	1.64%	677.6	1.46%
RBPJ:Ebox/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e0	-1.357e+00	0.3984	105.0	3.31%	1440.2	3.10%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e0	-1.295e+00	0.4212	96.0	3.02%	1320.0	2.84%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e0	-1.285e+00	0.4225	586.0	18.46%	8395.4	18.04%
GRE(NR/IR3)/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	-1.268e+00	0.4272	36.0	1.13%	474.9	1.02%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-1.268e+00	0.4272	168.0	5.29%	2352.7	5.06%
c-Myc(HLH)/LNCAP-cMyc-ChIP-Seq(unpublished)/Homer	VCCACGTG	1e0	-1.188e+00	0.4571	88.0	2.77%	1217.5	2.62%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e0	-1.175e+00	0.4606	66.0	2.08%	905.3	1.95%
E2F(E2F)/Cell-Cycle-Exp/Homer	TTSGCGCGAAAA	1e0	-1.157e+00	0.4660	8.0	0.25%	94.6	0.20%
Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e0	-1.141e+00	0.4706	36.0	1.13%	483.2	1.04%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e0	-1.128e+00	0.4738	112.0	3.53%	1568.1	3.37%
BMAL1(HLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e0	-1.113e+00	0.4781	510.0	16.07%	7336.2	15.77%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e0	-1.112e+00	0.4781	221.0	6.96%	3142.8	6.76%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e0	-1.109e+00	0.4781	17.0	0.54%	219.0	0.47%
LXRE(NR/DR4)/BLRP(RAW)-LXRb-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e0	-1.103e+00	0.4781	13.0	0.41%	164.3	0.35%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e0	-1.082e+00	0.4818	139.0	4.38%	1963.5	4.22%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e0	-1.067e+00	0.4864	521.0	16.41%	7509.9	16.14%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e0	-1.056e+00	0.4891	252.0	7.94%	3602.8	7.74%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e0	-1.027e+00	0.5003	202.0	6.36%	2883.0	6.20%
GRE/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e0	-1.024e+00	0.5003	67.0	2.11%	935.1	2.01%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e0	-1.024e+00	0.5003	31.0	0.98%	422.0	0.91%
PPARE(NR/DR1)/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e0	-1.004e+00	0.5038	307.0	9.67%	4412.1	9.48%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e0	-9.936e-01	0.5060	79.0	2.49%	1111.9	2.39%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e0	-8.868e-01	0.5599	11.0	0.35%	146.7	0.32%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson et al.)/Homer	GYCATCMATCAT	1e0	-8.777e-01	0.5619	24.0	0.76%	332.2	0.71%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e0	-8.647e-01	0.5662	260.0	8.19%	3761.9	8.09%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e0	-8.484e-01	0.5724	358.0	11.28%	5195.8	11.17%
PAX5-shortForm(Paired/Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e0	-7.636e-01	0.6196	28.0	0.88%	399.6	0.86%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer	ATTTTCCATT	1e0	-7.597e-01	0.6196	206.0	6.49%	2998.6	6.45%
CEBP(bZIP)/CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e0	-7.471e-01	0.6232	145.0	4.57%	2109.2	4.53%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e0	-7.226e-01	0.6353	170.0	5.36%	2480.4	5.33%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e0	-7.176e-01	0.6353	137.0	4.32%	1998.5	4.30%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e0	-6.786e-01	0.6568	257.0	8.10%	3766.3	8.10%
NPAS2(HLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e0	-6.620e-01	0.6644	296.0	9.33%	4343.2	9.34%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e0	-6.576e-01	0.6644	28.0	0.88%	409.2	0.88%
NFkB-p65-Rel(RHD)/LPS-exp(GSE23622)/Homer	GGAAATTCCC	1e0	-6.223e-01	0.6841	16.0	0.50%	235.3	0.51%
bHLHE40(HLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e0	-5.972e-01	0.6979	59.0	1.86%	874.2	1.88%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e0	-5.927e-01	0.6979	131.0	4.13%	1937.6	4.16%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e0	-5.858e-01	0.6987	141.0	4.44%	2086.8	4.49%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer	TBGCACGCAA	1e0	-5.840e-01	0.6987	135.0	4.25%	1998.4	4.30%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e0	-5.797e-01	0.6987	667.0	21.01%	9822.9	21.11%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e0	-5.783e-01	0.6987	304.0	9.58%	4488.9	9.65%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	-5.641e-01	0.6997	95.0	2.99%	1412.8	3.04%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e0	-5.389e-01	0.7140	39.0	1.23%	586.3	1.26%
RXR(NR/DR1)/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e0	-5.337e-01	0.7142	363.0	11.44%	5373.0	11.55%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e0	-5.167e-01	0.7229	153.0	4.82%	2282.0	4.90%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e0	-5.126e-01	0.7229	82.0	2.58%	1230.7	2.65%
BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer	NHAACBGYYV	1e0	-5.077e-01	0.7229	436.0	13.74%	6459.9	13.88%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e0	-4.992e-01	0.7249	131.0	4.13%	1960.9	4.21%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e0	-4.939e-01	0.7252	4.0	0.13%	62.2	0.13%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e0	-4.895e-01	0.7252	30.0	0.95%	458.0	0.98%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e0	-4.346e-01	0.7622	121.0	3.81%	1830.0	3.93%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e0	-4.089e-01	0.7783	1.0	0.03%	16.8	0.04%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e0	-3.849e-01	0.7934	73.0	2.30%	1124.3	2.42%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e0	-3.499e-01	0.8178	216.0	6.81%	3274.7	7.04%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e0	-3.445e-01	0.8183	95.0	2.99%	1466.8	3.15%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e0	-3.397e-01	0.8185	3.0	0.09%	54.5	0.12%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e0	-3.285e-01	0.8238	19.0	0.60%	312.5	0.67%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e0	-3.267e-01	0.8238	66.0	2.08%	1033.5	2.22%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer	CYAAAAATAG	1e0	-3.224e-01	0.8238	78.0	2.46%	1216.6	2.61%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e0	-2.809e-01	0.8521	53.0	1.67%	847.2	1.82%
TR4(NR/DR1)/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e0	-2.730e-01	0.8549	29.0	0.91%	478.9	1.03%
Mouse_Recombination_Hotspot/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e0	-2.492e-01	0.8715	11.0	0.35%	196.2	0.42%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e0	-2.440e-01	0.8715	20.0	0.63%	342.4	0.74%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e0	-2.440e-01	0.8715	20.0	0.63%	342.4	0.74%
NFkB-p50,p52(RHD)/p50-ChIP-Chip(Schreiber et al.)/Homer	GGGGGAATCCCC	1e0	-2.430e-01	0.8715	22.0	0.69%	375.0	0.81%
ERE(NR/IR3)/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	-2.289e-01	0.8735	67.0	2.11%	1078.8	2.32%
CHR/Cell-Cycle-Exp/Homer	SRGTTTCAAA	1e0	-2.140e-01	0.8827	126.0	3.97%	1985.6	4.27%
STAT6/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e0	-1.807e-01	0.9086	127.0	4.00%	2018.8	4.34%
ETS:RUNX/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e0	-1.505e-01	0.9323	20.0	0.63%	364.8	0.78%
VDR(NR/DR3)/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e0	-1.180e-01	0.9589	50.0	1.58%	860.4	1.85%
Pax7-longest(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	-1.115e-01	0.9609	2.0	0.06%	56.7	0.12%
NRF1/Promoter/Homer	STGCGCATGCGC	1e0	-9.311e-02	0.9745	22.0	0.69%	418.7	0.90%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e0	-5.913e-02	1.0000	11.0	0.35%	244.6	0.53%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e0	-5.864e-02	1.0000	84.0	2.65%	1447.1	3.11%
EBNA1(EBV virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e0	-5.278e-02	1.0000	2.0	0.06%	69.8	0.15%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e0	-4.101e-02	1.0000	70.0	2.21%	1247.0	2.68%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e0	-3.580e-02	1.0000	60.0	1.89%	1093.8	2.35%
HIF-1a(HLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e0	-2.765e-02	1.0000	34.0	1.07%	674.2	1.45%
GFY-Staf/Promoters/Homer	RACTACAATTCCCAGAAKGC	1e0	-2.342e-02	1.0000	4.0	0.13%	130.3	0.28%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	-1.662e-02	1.0000	4.0	0.13%	137.2	0.29%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e0	-1.526e-02	1.0000	44.0	1.39%	871.6	1.87%
HIF2a(HLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e0	-8.712e-03	1.0000	50.0	1.58%	1000.0	2.15%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e0	-7.512e-03	1.0000	5.0	0.16%	176.1	0.38%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e0	-6.135e-03	1.0000	8.0	0.25%	246.7	0.53%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e0	-2.586e-03	1.0000	1243.0	39.16%	19348.4	41.59%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e0	-3.670e-04	1.0000	100.0	3.15%	2000.3	4.30%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e0	-0.000e+00	1.0000	14.0	0.44%	610.4	1.31%
T1ISRE(IRF)/Ifnb-Exp/Homer	ACTTTCGTTTCT	1e0	0.000e+00	1.0000	0.0	0.00%	27.5	0.06%