Information for motif1


Reverse Opposite:

p-value:1e-49
log p-value:-1.140e+02
Information Content per bp:1.662
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif23.16%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif1.19%
Average Position of motif in Targets105.8 +/- 60.8bp
Average Position of motif in Background93.6 +/- 32.6bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0528.1_ZNF263/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:DGGAGGAGGARG----------
-GGAGGAGGAGGGGGAGGAGGA

MA0516.1_SP2/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:DGGAGGAGGARG---
GGGNGGGGGCGGGGC

MA0598.1_EHF/Jaspar

Match Rank:3
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:DGGAGGAGGARG-
-----CAGGAAGG

MA0080.3_Spi1/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:DGGAGGAGGARG---
AAAAAGAGGAAGTGA

MA0162.2_EGR1/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:DGGAGGAGGARG---
-GGCGGGGGCGGGGG

MA0079.3_SP1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:DGGAGGAGGARG
-GGGGGCGGGGC

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.63
Offset:4
Orientation:forward strand
Alignment:DGGAGGAGGARG--
----AGAGGAAGTG

PB0058.1_Sfpi1_1/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:DGGAGGAGGARG---
-TTAAGAGGAAGTTA

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:DGGAGGAGGARG-
---GGGAGGACNG

MA0474.1_Erg/Jaspar

Match Rank:10
Score:0.62
Offset:4
Orientation:forward strand
Alignment:DGGAGGAGGARG---
----ACAGGAAGTGG