| p-value: | 1e-23 |
| log p-value: | -5.388e+01 |
| Information Content per bp: | 1.831 |
| Number of Target Sequences with motif | 24.0 |
| Percentage of Target Sequences with motif | 13.56% |
| Number of Background Sequences with motif | 1.5 |
| Percentage of Background Sequences with motif | 1.00% |
| Average Position of motif in Targets | 115.1 +/- 56.7bp |
| Average Position of motif in Background | 73.2 +/- 7.1bp |
| Strand Bias (log2 ratio + to - strand density) | 0.3 |
| Multiplicity (# of sites on avg that occur together) | 1.04 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
| Match Rank: | 1 |
| Score: | 0.64
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -CAGCCTGSCT
BCAGACWA--- |
|
|
|
POL010.1_DCE_S_III/Jaspar
| Match Rank: | 2 |
| Score: | 0.64
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | CAGCCTGSCT
CAGCC----- |
|
|
|
Pax8(Paired/Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
| Match Rank: | 3 |
| Score: | 0.59
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -CAGCCTGSCT----
SCAGYCADGCATGAC |
|
|
|
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 4 |
| Score: | 0.59
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -CAGCCTGSCT
CCAGACAG--- |
|
|
|
POL009.1_DCE_S_II/Jaspar
| Match Rank: | 5 |
| Score: | 0.56
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --CAGCCTGSCT
CACAGN------ |
|
|
|
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 6 |
| Score: | 0.56
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -CAGCCTGSCT
CCAGACRSVB- |
|
|
|
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
| Match Rank: | 7 |
| Score: | 0.56
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---CAGCCTGSCT-
TGGCAGNCTGCCAG |
|
|
|
PB0151.1_Myf6_2/Jaspar
| Match Rank: | 8 |
| Score: | 0.55
| | Offset: | -5
| | Orientation: | forward strand |
| Alignment: | -----CAGCCTGSCT
AGCAACAGCCGCACC |
|
|
|
POL006.1_BREu/Jaspar
| Match Rank: | 9 |
| Score: | 0.55
| | Offset: | 1
| | Orientation: | forward strand |
| Alignment: | CAGCCTGSCT
-AGCGCGCC- |
|
|
|
MA0112.2_ESR1/Jaspar
| Match Rank: | 10 |
| Score: | 0.54
| | Offset: | -9
| | Orientation: | forward strand |
| Alignment: | ---------CAGCCTGSCT-
GGCCCAGGTCACCCTGACCT |
|
|
|
