Information for motif16


Reverse Opposite:

p-value:1e-23
log p-value:-5.388e+01
Information Content per bp:1.798
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif13.56%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif1.13%
Average Position of motif in Targets95.2 +/- 54.6bp
Average Position of motif in Background134.2 +/- 37.6bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0133.1_BRCA1/Jaspar

Match Rank:1
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GCTACAAC--
---ACAACAC

MA0027.1_En1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCTACAAC--
GANCACTACTT

PB0090.1_Zbtb12_1/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GCTACAAC-----
NNGATCTAGAACCTNNN

PB0154.1_Osr1_2/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GCTACAAC----
ACATGCTACCTAATAC

PB0120.1_Foxj1_2/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCTACAAC-----
ATGTCACAACAACAC

PB0122.1_Foxk1_2/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GCTACAAC----
CAAACAACAACACCT

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCTACAAC--
RNAACAATGG

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCTACAAC--
GCCACACCCA

PB0155.1_Osr2_2/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GCTACAAC----
ACTTGCTACCTACACC

PB0117.1_Eomes_2/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GCTACAAC-----
NNGGCGACACCTCNNN