Information for motif24


Reverse Opposite:

p-value:1e-18
log p-value:-4.152e+01
Information Content per bp:1.786
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif11.30%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets84.3 +/- 55.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-CMGGCACAGG
CCAGGAACAG-

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CMGGCACAGG
----CACAGN

MA0058.2_MAX/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CMGGCACAGG-
-AAGCACATGG

MA0076.2_ELK4/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CMGGCACAGG
NCCGGAAGTGG

MA0062.2_GABPA/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CMGGCACAGG-
CCGGAAGTGGC

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:6
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CMGGCACAGG----
----AACAGGAAGT

PB0208.1_Zscan4_2/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CMGGCACAGG-----
CGAAGCACACAAAATA

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CMGGCACAGG
RCCGGAAGTD-

MA0146.2_Zfx/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CMGGCACAGG----
CAGGCCNNGGCCNN

MA0475.1_FLI1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CMGGCACAGG
ACAGGAAGTGG