Information for motif29


Reverse Opposite:

p-value:1e-15
log p-value:-3.591e+01
Information Content per bp:1.747
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif15.25%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif2.23%
Average Position of motif in Targets102.1 +/- 58.7bp
Average Position of motif in Background128.3 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0130.1_ZNF354C/Jaspar

Match Rank:1
Score:0.86
Offset:2
Orientation:forward strand
Alignment:RGATCCAC
--ATCCAC

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-RGATCCAC---
SSAATCCACANN

MA0027.1_En1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-RGATCCAC--
GANCACTACTT

MA0479.1_FOXH1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--RGATCCAC-
TCCAATCCACA

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:5
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----RGATCCAC----
NTNNCGTATCCAAGTNN

MA0122.1_Nkx3-2/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:RGATCCAC----
---NCCACTTAN

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:RGATCCAC----
NWAACCACADNN

PB0114.1_Egr1_2/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--RGATCCAC------
NNAGTCCCACTCNNNN

MA0056.1_MZF1_1-4/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:RGATCCAC-
---TCCCCA

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:RGATCCAC---
-AAACCACANN