Information for motif3


Reverse Opposite:

p-value:1e-41
log p-value:-9.520e+01
Information Content per bp:1.643
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif20.34%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.75%
Average Position of motif in Targets115.7 +/- 55.5bp
Average Position of motif in Background108.5 +/- 62.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0512.1_Rxra/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:RCTGACCCCWGM
NCTGACCTTTG-

PB0118.1_Esrra_2/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---RCTGACCCCWGM--
NNNNTTGACCCCTNNNN

MA0155.1_INSM1/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:RCTGACCCCWGM--
--CGCCCCCTGACA

PB0030.1_Hnf4a_1/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---RCTGACCCCWGM--
NNANTTGACCCCTNNNN

PB0057.1_Rxra_1/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---RCTGACCCCWGM--
TGTCGTGACCCCTTAAT

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:RCTGACCCCWGM
-CTGACCTTTG-

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-RCTGACCCCWGM
TGCTGACTCA---

MA0154.2_EBF1/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:RCTGACCCCWGM--
---GTCCCCAGGGA

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.54
Offset:3
Orientation:forward strand
Alignment:RCTGACCCCWGM---
---GTCCCCAGGGGA

MA0524.1_TFAP2C/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:RCTGACCCCWGM---
CATGGCCCCAGGGCA