Information for motif31


Reverse Opposite:

p-value:1e-15
log p-value:-3.565e+01
Information Content per bp:1.541
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif10.17%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.66%
Average Position of motif in Targets114.1 +/- 53.9bp
Average Position of motif in Background38.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:WCAGCTWCCTCA
NNACTTGCCTT-

MA0598.1_EHF/Jaspar

Match Rank:2
Score:0.59
Offset:3
Orientation:forward strand
Alignment:WCAGCTWCCTCA
---CCTTCCTG-

PB0154.1_Osr1_2/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-WCAGCTWCCTCA---
ACATGCTACCTAATAC

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:WCAGCTWCCTCA
NNACTTACCTN-

FXR(NR/IR1)/Liver-FXR-ChIP-Seq(Chong et al.)/Homer

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---WCAGCTWCCTCA
AGGTCANTGACCTN-

PB0155.1_Osr2_2/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-WCAGCTWCCTCA---
ACTTGCTACCTACACC

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:WCAGCTWCCTCA---
---NWAACCACADNN

MA0499.1_Myod1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-WCAGCTWCCTCA
TGCAGCTGTCCCT

MA0090.1_TEAD1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:WCAGCTWCCTCA-
-CACATTCCTCCG

MA0500.1_Myog/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--WCAGCTWCCTCA
NNGCAGCTGTC---