Information for motif36


Reverse Opposite:

p-value:1e-13
log p-value:-3.003e+01
Information Content per bp:1.790
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif9.04%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif1.29%
Average Position of motif in Targets94.7 +/- 53.1bp
Average Position of motif in Background131.0 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0093.1_Zfp105_1/Jaspar

Match Rank:1
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---TTGTTKCTTTTR
NTNTTGTTGTTTGTN

MA0041.1_Foxd3/Jaspar

Match Rank:2
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--TTGTTKCTTTTR
GAATGTTTGTTT--

MA0042.1_FOXI1/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TTGTTKCTTTTR
GGATGTTTGTTT--

NF1:FOXA1/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TTGTTKCTTTTR---
NNTGTTTATTTTGGCA

MF0011.1_HMG_class/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TTGTTKCTTTTR
ATTGTT-------

PB0119.1_Foxa2_2/Jaspar

Match Rank:6
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TTGTTKCTTTTR
NCNTTTGTTATTTNN-

MF0005.1_Forkhead_class/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TTGTTKCTTTTR
-TGTTTATTT--

PB0182.1_Srf_2/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TTGTTKCTTTTR--
NNNNTTTTTTTTTNAAC

PB0148.1_Mtf1_2/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTGTTKCTTTTR-
NNTTTTTCTTATNT

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TTGTTKCTTTTR
CCATTGTTNY-----